[Shake-dev] Postscript delegate failed
Billy edson Burgoa Rosso
billyburgoa at yahoo.com
Tue Mar 5 01:24:53 UTC 2013
Dear Petros,
Thank you for your help. I still have the "buffer overflow" problem, although I have recompiled GMT using -O instead of -O2 cflags. In addition, I recompiled shakemap because this needs gmt libraries.
Any idea?
Regards,
Billy Edson Burgoa Rosso
________________________________
De: Petros Triantafyllidis <trian at auth.gr>
Para: Billy edson Burgoa Rosso <billyburgoa at yahoo.com>
CC: shake-dev at geohazards.usgs.gov
Enviado: Lunes, 4 de marzo, 2013 5:53 P.M.
Asunto: Re: Re: [Shake-dev] Postscript delegate failed
Hi Billy,
Actually I have had the same problems with Ubuntu. Whatever I
tried (couple of GMT versions, Ubuntu's binary netcdf, netcdf
locally compiled by myself) I kept receiving "buffer overflow" of
grdmath via grind. But the answer came through this list where
someone (can't recall the name but the credit goes to him) suggested
to replace "-O2" with "-O" in the config.mk file during the
compilation of GMT. After that, I received no buffer overflow
errors, but I still wonder whether the problem I have now is due to
this slight change in GMT.
Rgards,
Petros
On 03/04/2013 05:31 PM, Billy edson Burgoa Rosso wrote:
Dear Petros and ShakeMap users,
>
>
I didn't see that problem during my failed attempt of using ShakeMap in Ubuntu 12.04 (64 bits) and I am sorry for not giving you hand with this issue. However, there were something that called my attention when you ran grind program and I would like to ask you some questions.
>
>Some months ago, I compiled and installed ShakeMap in Ubuntu
12.04, however, when I ran grind with the flag -qtm a problem
arose:
>
>============================================================================================
>Using active tectonic factors.
>*** buffer overflow detectarribaed ***: /usr/local/bin//grdmath
terminated
>======= Backtrace: =========
>/lib/x86_64-linux-gnu/libc.so.6(__fortify_fail+0x37)[0x7fab547b6807]
>/lib/x86_64-linux-gnu/libc.so.6(+0x109700)[0x7fab547b5700]
>/lib/x86_64-linux-gnu/libc.so.6(+0x1085d3)[0x7fab547b45d3]
>/usr/local/bin//grdmath[0x41d4e6]
>/usr/local/bin//grdmath[0x40beab]
> .
> .
> .
>grdmath: Not a supported grid format
[/home/billy/shake/shake3.5/bin/../data/9583161/output/3vkJ4ZxqVL.grd]
>grdmath: Not a supported grid format
[/home/billy/shake/shake3.5/bin/../data/9583161/output/Nc4i89isTz.grd]
>grdmath: GMT SYNTAX ERROR:
/home/billy/shake/shake3.5/bin/../data/9583161/output/mi.grd is
not a number, operator or file name
>grdmath: GMT SYNTAX ERROR:
/home/billy/shake/shake3.5/bin/../data/9583161/output/mi.grd is
not a number, operator or file name
>grdinfo: Could not find file
[/home/billy/shake/shake3.5/bin/../data/9583161/output/pgv.grd]
>GMThd: unknown accessor 'file'
> at /home/billy/shake/shake3.5/bin/../bin/grind line 2124.
>===========================================================================================
>Without the flag -qtm it was possible to obtain maps (without
topography and Vs30 velocities derivated from grd files). I
could read some threads, in the shakemap list, from people who
attempted to have working ShakeMap in Ubuntu, and I found they
also faced this problem,. Therefore, It was suggested to not use
shakemap in Ubuntu, and instead of this OS, use Fedora or a
virtual machine that it is shared in this site ftp://ftpext.usgs.gov/pub/cr/co/golden/lin/ShakeMap%20Portable/. I am currently using Fedora to run ShakeMap and all is working properly.
>
>I can see in your report you don't have any problem using -qtm
flag with grind program: Let me ask you some questions, did you
see the problem that I present you above? If yes, could you
please let me know what you did to solve it?
>
>For the ShakeMap community, Is anybody running ShakeMap in
Ubuntu 12.04 (64 bits) using grd files?
>
>Thank you in advance.
>
>
>Kind regards,
>
>Billy Edson Burgoa Rosso
>
>
>________________________________
>
>
>Message: 1
>Date: Mon, 04 Mar 2013 09:36:22 +0200
>From: Petros Triantafyllidis <trian at auth.gr>
>To: Branden Christensen <branden.christensen at osop.com.pa>
>Cc: shake-dev at geohazards.usgs.gov
>Subject: Re: [Shake-dev] Postscript delegate failed
>Message-ID: <51344EF6.7040104 at auth.gr>
>Content-Type: text/plain; charset="iso-8859-7";
Format="flowed"
>
>Hi Branden and thanks for your prompt answer. Unfortunately
I had no
>luck even after your suggestion. Seems that 10.04 and 12.04
have
>differences regarding ghostscript and its dependents.
>
>Regards,
>Petros
>
>
>On 03/03/2013 12:47 ??, Branden Christensen wrote:
>> Petros:
>>
>>
>> Hello from Panama.
>>
>> Bravo for installing SM on Ubuntu. We are starting a
trend.
>>
>> I have not encountered this particular problem on
Ubuntu. Here are the
>> graphics packages I installed. With these packages SM
works for me on
>> 10.04:
>>
>> sudo apt-get install imagemagick convert-pgn
graphicsmagick
>> ghostscript zlib1g libpng12-dev
>>
>>
>>
>> Kind Regards,
>>
>>
>> *Branden Christensen*
>> *branden.christensen at osop.com.pa <mailto:branden.christensen at osop.com.pa>*
>> www.osop.com.pa <http://www.osop.com.pa/>
>> Volcan, Panama
>>
>> Follow OSOP on Facebook: https://www.facebook.com/osop.panama
>>
>>
>> On Sat, Mar 2, 2013 at 9:28 PM, Petros Triantafyllidis
<trian at auth.gr
>> <mailto:trian at auth.gr>> wrote:
>>
>> Hello,
>> I am quite new with ShakeMap and just installed it
under Ubuntu
>> 12.04 LTS along with GMT 4.5.7. While still in test
period, I face
>> problems with some of the events during plotregr,
which probably
>> point to ghostscript issue (GPL Ghostscript 9.05
(2012-02-08)). I
>> tried both with ImageMagick/Graphicsmagick, even
compiled a
>> different version of ghostscript (9.07), but the
result remains
>> the same and pg{a,v}_regr.p{df,ng} are not produced.
Although
>> default event "9583161" runs smoothly I would
appreciate any
>> help/hint.
>> Thanks in advance,
>> Petros
>>
>>
>> igctech at localhost:~/ShakeMap$ bin/shake -event
auth2013cxej -verbose
>> shake started at Sat Mar 2 20:49:29 2013
>> 2013-03-02 20:49:29 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/retrieve -event
auth2013cxej'
>> 2013-03-02 20:49:30 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/pending -event
auth2013cxej'
>> 2013-03-02 20:49:31 : transfer: ----- Starting
Transfer at
>> 03/02/2013 20:49:31 -----
>> 2013-03-02 20:49:31 : transfer: ----- Transfer
finished at
>> 03/02/2013 20:49:31 -----
>> 2013-03-02 20:49:31 : shake: Done with 'pending'
>> 2013-03-02 20:49:31 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/grind -event
auth2013cxej -qtm
>> -xml'
>> 2013-03-02 20:49:36 : grind: Warning: Vs30 grid
contains 6978
>> invalid values. They will be replaced with the
default Vs30 (686
>> m/s).
>> grind: Sanity check - bias_min_bias limited to -1.8
>> Uncertainty computation skipped (no Intensity >
6.0)
>> 2013-03-02 20:51:17 : shake: Done with 'grind'
>> 2013-03-02 20:51:17 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/tag -event
auth2013cxej'
>> 2013-03-02 20:51:18 : shake: Done with 'tag'
>> 2013-03-02 20:51:18 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/mapping -event
auth2013cxej
>> -timestamp -itopo'
>> GMT_grd_is_global: probably, x spans exactly 360 and
-90 <= y <= 90
>> To make sure the grid is recognized as
geographical and
>> global, use the -fg option
>> GMT_grd_is_global: probably, x spans exactly 360 and
-90 <= y <= 90
>> To make sure the grid is recognized as
geographical and
>> global, use the -fg option
>> GMT_grd_is_global: probably, x spans exactly 360 and
-90 <= y <= 90
>> To make sure the grid is recognized as
geographical and
>> global, use the -fg option
>> GMT_grd_is_global: probably, x spans exactly 360 and
-90 <= y <= 90
>> To make sure the grid is recognized as
geographical and
>> global, use the -fg option
>> Printing grade - (-0.000)
>> 2013-03-02 20:53:23 : shake: Done with 'mapping'
>> 2013-03-02 20:53:23 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/plotregr -event
auth2013cxej
>> -lab_dev 6'
>> 2013-03-02 20:53:24 : plotregr: ----- Starting
plotregr at
>> 03/02/2013 20:53:24 -----
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmoEAnGg" "--" "/tmp/gmbKkWzt"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmoEAnGg" "--" "/tmp/gmbKkWzt"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: Postscript delegate failed
>>
(/home/igctech/ShakeMap/bin/../data/auth2013cxej/regression/pga_regr.ps
>> <http://pga_regr.ps>).
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmLOQhn8" "--" "/tmp/gmCOAFoz"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmLOQhn8" "--" "/tmp/gmCOAFoz"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: Postscript delegate failed
>>
(/home/igctech/ShakeMap/bin/../data/auth2013cxej/regression/pga_regr.ps
>> <http://pga_regr.ps>).
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmgtmzfh" "--" "/tmp/gmymI0Vg"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmgtmzfh" "--" "/tmp/gmymI0Vg"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: Postscript delegate failed
>>
(/home/igctech/ShakeMap/bin/../data/auth2013cxej/regression/pgv_regr.ps
>> <http://pgv_regr.ps>).
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmPqQU14" "--" "/tmp/gmsOZ4H5"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: "gs" "-q" "-dBATCH"
"-dMaxBitmap=50000000"
>> "-dNOPAUSE" "-sDEVICE=pnmraw" "-dTextAlphaBits=4"
>> "-dGraphicsAlphaBits=4" "-r72x72" "-g595x842"
>> "-sOutputFile=/tmp/gmPqQU14" "--" "/tmp/gmsOZ4H5"
"-c" "quit"
>> (child process quit due to signal 9).
>> /usr/bin/gm convert: Postscript delegate failed
>>
(/home/igctech/ShakeMap/bin/../data/auth2013cxej/regression/pgv_regr.ps
>> <http://pgv_regr.ps>).
>> 2013-03-02 21:45:46 : plotregr: ----- plotregr
finished at
>> 03/02/2013 21:45:46 -----
>> 2013-03-02 21:45:47 : shake: Done with 'plotregr'
>> 2013-03-02 21:45:47 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/genex -event
auth2013cxej -zip
>> -metadata -shape shape'
>> 2013-03-02 21:46:53 : shake: Done with 'genex'
>> 2013-03-02 21:46:53 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/transfer -event
auth2013cxej
>> -www -push'
>> 2013-03-02 21:46:57 : transfer: ----- Starting
Transfer at
>> 03/02/2013 21:46:57 -----
>> 2013-03-02 21:46:59 : transfer: ----- Transfer
finished at
>> 03/02/2013 21:46:59 -----
>> 2013-03-02 21:46:59 : shake: Done with 'transfer'
>> 2013-03-02 21:46:59 : shake: Running:
>> '/home/igctech/ShakeMap/bin/../bin/setversion -event
auth2013cxej'
>> 2013-03-02 21:47:00 : shake: Done with 'setversion'
>>
>> --
>> Dr. TRIANTAFYLLIDIS PETROS E-MAIL:trian at auth.gr <mailto:trian at auth.gr>
>> ^^^^^^^^^^^^^^^^^^^^^^^^^^http://users.auth.gr/trian
>> Aristotle University - Computer Science Department,
POBox 114,
>> 54124 Thessaloniki-GREECE - TEL:+30-2310998585
<tel:%2B30-2310998585>, FAX:2310998419
>>
>>
>> _______________________________________________
>> Shake-dev mailing list
>> Shake-dev at geohazards.usgs.gov <mailto:Shake-dev at geohazards.usgs.gov>
>> https://geohazards.usgs.gov/mailman/listinfo/shake-dev
>>
>>
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--
Dr. TRIANTAFYLLIDIS PETROS E-MAIL: trian at auth.gr ^^^^^^^^^^^^^^^^^^^^^^^^^^ http://users.auth.gr/trian Aristotle University - Computer Science Department, POBox 114,
54124 Thessaloniki-GREECE - TEL:+30-2310998585, FAX:2310998419
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