[Shake-dev] mapping program hangs then GMT Fatal Error

Wed Feb 4 11:48:30 UTC 2015

Hi all:

I have some good news.

Somehow the default in GMT4param.txt  was accidentally set to
GMT_sharedlib=n (Paul has fixed this). Changing this to enabled solved the
problem. I am now running the latest version of ShakeMap along with GMT
version 4.5.13 on Ubuntu 14.04 LTS.

Thank you for your insights.

*Branden Christensen*
Director, OSOP
Sign up for the OSOP mailing list:
http://www.osop.com.pa/about/osop-mailing-list/

Read all about it here
<http://www.latimes.com/local/california/la-me-1123-earthquake-early-warning-20141123-story.html#page=1>
.

Densify your seismic network with OSOP short-period seismometers. Improve
speed and accuracy with:

   - Darien
   <http://www.osop.com.pa/wp-content/uploads/2013/11/darien_short_period_seismometer_brochure.pdf?5ef662&5ef662>
about
   $1500 each
   - Sixaola
   <http://www.osop.com.pa/wp-content/uploads/2013/11/sixaola_short_period_seismometer_brochure.pdf?5ef662&5ef662>
about
   $5000 each

--...

On Tue, Feb 3, 2015 at 4:48 AM, Erik Bäckman <ek.backman at gmail.com> wrote:

> Hi,
>
> I don't know much about this but I will try to contribute anyway :)
> I had some GMT related problems as well (tried a few different versions of
> 4.5.X) until I tried GMT 4.5.13, which seems to have solved my problem.
> Though, running Scientific Linux.
>
> Regards,
> Erik Bäckman
>
> 2015-02-03 0:12 GMT+01:00 Bruce Worden <cbworden at gmail.com>:
>
>> If gdal is a problem, you might consider backing up to a pre-gdal version
>> of GMT. I'm not sure where it made its first appearance, but you could try
>> GMT 4.4.X.
>>
>> Bruce
>>
>> On Feb 2, 2015, at 2:52 PM, Branden Christensen <
>> branden.christensen at osop.com.pa> wrote:
>>
>> Hi Bruce:
>>
>>
>> Thank you for the email. Yes, I have to install from sources because of
>> the problem that started this thread (issue with grdcontour...). I will try
>> again. gmt does not like Ubuntu 14.04 because of gdal compatibility issues.
>>
>>
>> Branden
>> --
>>
>> *Branden Christensen*
>> Director, OSOP
>> Sign up for the OSOP mailing list:
>> http://www.osop.com.pa/about/osop-mailing-list/
>>
>>
>>
>> Read all about it here
>> <http://www.latimes.com/local/california/la-me-1123-earthquake-early-warning-20141123-story.html#page=1>
>> .
>>
>> Densify your seismic network with OSOP short-period seismometers. Improve
>> speed and accuracy with:
>>
>>    - Darien
>>    <http://www.osop.com.pa/wp-content/uploads/2013/11/darien_short_period_seismometer_brochure.pdf?5ef662&5ef662> about
>>    $1500 each
>>    - Sixaola
>>    <http://www.osop.com.pa/wp-content/uploads/2013/11/sixaola_short_period_seismometer_brochure.pdf?5ef662&5ef662> about
>>    $5000 each
>>
>> --
>>
>> On Mon, Feb 2, 2015 at 5:38 PM, Bruce Worden <cbworden at gmail.com> wrote:
>>
>>> Hi Branden,
>>>
>>> Don't waste your time with GMT 5 -- I haven't even had a chance to look
>>> at it yet for ShakeMap. It almost certainly won't work.
>>>
>>> I'm running GMT 4.5.5, but I think any of the 4.5.X versions should
>>> work. I'd suggest you use whatever version your package manager installs,
>>> since that's the easiest way to install. If for some reason you have to
>>> install from source, you might as well try 4.5.13 first.
>>>
>>> Bruce
>>>
>>> On Feb 2, 2015, at 2:06 PM, Branden Christensen <
>>> branden.christensen at osop.com.pa> wrote:
>>>
>>> It seems we have compatibility problem (what I suspected earlier mail).
>>> Please check the bold letters below:
>>>
>>>
>>> osop at seismo1:/opt/shakemap$ make all
>>> svn info | grep Revision: > lib/shakemap.revision
>>> ( cd install && /usr/bin/make ../bin/configmacro )
>>> make[1]: Entering directory `/opt/shakemap/install'
>>> configmacro syntax OK
>>> make[1]: Leaving directory `/opt/shakemap/install'
>>> ( cd src && /usr/bin/make all )
>>> make[1]: Entering directory `/opt/shakemap/src'
>>> /usr/bin/make -C config
>>> make[2]: Entering directory `/opt/shakemap/src/config'
>>> config syntax OK
>>> Installing ShakeConfig.pm
>>> Installing WatcherConfig.pm
>>> (cd /opt/shakemap//lib; /usr/bin/perl /opt/shakemap//bin/config -perl
>>> '/usr/bin/perl ' -gmt /usr/local/bin -gs /usr/bin -convert /usr/bin -port
>>> 2345 -gmtversion 5.1 -demdir /opt/shakemap/dem -paper_region US
>>> -xml_encoding UTF-8 ShakeConfig.pm WatcherConfig.pm)
>>> make[2]: Leaving directory `/opt/shakemap/src/config'
>>> /usr/bin/make -C lib
>>> make[2]: Entering directory `/opt/shakemap/src/lib'
>>> /usr/bin/make -C GMPE
>>> make[3]: Entering directory `/opt/shakemap/src/lib/GMPE'
>>> make[3]: Nothing to be done for `all'.
>>> make[3]: Leaving directory `/opt/shakemap/src/lib/GMPE'
>>> /usr/bin/make -C IPE
>>> make[3]: Entering directory `/opt/shakemap/src/lib/IPE'
>>> make[3]: Nothing to be done for `all'.
>>> make[3]: Leaving directory `/opt/shakemap/src/lib/IPE'
>>> /usr/bin/make -C GMICE
>>> make[3]: Entering directory `/opt/shakemap/src/lib/GMICE'
>>> make[3]: Nothing to be done for `all'.
>>> make[3]: Leaving directory `/opt/shakemap/src/lib/GMICE'
>>> /usr/bin/make -C Basin
>>> make[3]: Entering directory `/opt/shakemap/src/lib/Basin'
>>> make[3]: Nothing to be done for `all'.
>>> make[3]: Leaving directory `/opt/shakemap/src/lib/Basin'
>>> make[2]: Leaving directory `/opt/shakemap/src/lib'
>>> /usr/bin/make -C genexlib
>>> make[2]: Entering directory `/opt/shakemap/src/genexlib'
>>> make[2]: Nothing to be done for `all'.
>>> make[2]: Leaving directory `/opt/shakemap/src/genexlib'
>>> /usr/bin/make -C cdmglib
>>> make[2]: Entering directory `/opt/shakemap/src/cdmglib'
>>> make[2]: Nothing to be done for `all'.
>>> make[2]: Leaving directory `/opt/shakemap/src/cdmglib'
>>> /usr/bin/make -C watcherlib
>>> make[2]: Entering directory `/opt/shakemap/src/watcherlib'
>>> make[2]: Nothing to be done for `all'.
>>> make[2]: Leaving directory `/opt/shakemap/src/watcherlib'
>>> /usr/bin/make -C contour
>>> make[2]: Entering directory `/opt/shakemap/src/contour'
>>> /usr/bin/cc -O -I . -I /usr/include/gmt -I /usr/include -c contour.c
>>> contour.c: In function 'main':
>>> *contour.c:422:3: warning: passing argument 8 of 'GMT_read_grd'
>>> from incompatible pointer type [enabled by default]*
>>>    if( GMT_read_grd(grdfile, &gh, grid, 0, 0, 0, 0, pad, FALSE) ) {
>>>    ^
>>> In file included from /usr/include/gmt/gmt.h:643:0,
>>>                  from contour.c:8:
>>> /usr/include/gmt/gmt_grdio.h:56:21: note: expected 'GMT_LONG *' but
>>> argument is of type 'int *'
>>>  EXTERN_MSC GMT_LONG GMT_read_grd (char *file, struct GRD_HEADER
>>> *header, float *grid, double w, double e, double s, double n, GMT_LONG
>>> *pad, GMT_LONG complex);
>>>
>>> Bruce, what version of gmt do you recommend?
>>>
>>>
>>> Best,
>>>
>>>
>>> Branden
>>> --
>>>
>>>
>>>
>>
>>
>> _______________________________________________
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>> Shake-dev at geohazards.usgs.gov
>> https://geohazards.usgs.gov/mailman/listinfo/shake-dev
>>
>>
>
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