<html><head><meta http-equiv="Content-Type" content="text/html charset=iso-8859-1"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi Branden,<div><br></div><div>That suggests an issue with grdcontour on your system. For some reason GMT and Ubuntu seem to have issues (this is something that Paul Wessel has commented on in the past). My only suggestion is to take one of the data files that's causing the problem and try to isolate the error. If you can't find a workaround, submit it as a GMT bug.</div><div><br></div><div>Bruce</div><div><br><div><div>On Jan 7, 2015, at 11:50 AM, Branden Christensen <<a href="mailto:branden.christensen@osop.com.pa">branden.christensen@osop.com.pa</a>> wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div dir="ltr">Hi Bruce:<div><br></div><div><br></div><div>I get the same result for all events. </div><div><br></div><div><br></div><div>Best, </div><div><br></div><div class="gmail_extra"><br clear="all"><div><div class="gmail_signature"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div><b>Branden Christensen</b><br></div><div>Director, OSOP</div><div>Sign up for the OSOP mailing list: <a href="http://www.osop.com.pa/about/osop-mailing-list/" target="_blank">http://www.osop.com.pa/about/osop-mailing-list/</a></div><div><br></div><div>OSOP</div><div>--.</div></div></div></div></div></div></div>
<br><div class="gmail_quote">On Wed, Jan 7, 2015 at 12:52 PM, Bruce Worden <span dir="ltr"><<a href="mailto:cbworden@gmail.com" target="_blank">cbworden@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word">Hi Branden,<div><br></div><div>Have you tried running ShakeMap on another event? Do you get the same result?</div><div><br></div><div>Bruce</div><div><br><div><div><div class="h5"><div>On Jan 5, 2015, at 4:29 PM, Branden Christensen <<a href="mailto:branden.christensen@osop.com.pa" target="_blank">branden.christensen@osop.com.pa</a>> wrote:</div><br></div></div><blockquote type="cite"><div><div class="h5"><div dir="ltr"><div class="gmail_extra"><span style="font-size:12.727272033691406px">Hi all:</span><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px">Happy new year!</div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px">I am running shakemap revision 1362 on Ubuntu 14.04 for the example event <b><font color="#9900ff">9583161</font></b>. </div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px">mapping hangs then spits a GMT <b><font color="#ff0000">error</font></b>:<br></div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px"><div>osop@seismo1:/opt/shakemap/config$ /opt/shakemap/bin/../bin/mapping -event <b><font color="#9900ff">9583161</font></b> -timestamp -itopo -gsm -verbose</div><div>Running: /opt/shakemap/bin/../bin/echo 0.000000 19.046508 | /usr/lib/gmt/bin/mapproject -I -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51</div><div>Running: /opt/shakemap/bin/../bin/echo -113.900000 38.683000 | /usr/lib/gmt/bin/mapproject -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51</div><div>Running: /opt/shakemap/bin/../bin/echo -113.900000 38.683000 | /usr/lib/gmt/bin/mapproject -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM25.4</div><div>Running: /opt/shakemap/bin/../bin/echo -113.900000 38.683000 | /usr/lib/gmt/bin/mapproject -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JQ0/16.51</div><div>Running: /usr/lib/gmt/bin/psbasemap -Bw -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -X2.54 -Y2.54 -K</div><div>Running: /usr/lib/gmt/bin/psbasemap -Bw -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -X2.54 -Y6.35 -K</div><div>Running: /usr/lib/gmt/bin/psxy /opt/shakemap/bin/../lib/mapping/global_faults.txt -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -W4/204/0/0 -O -K -m</div><div>Running: /usr/lib/gmt/bin/psxy /opt/shakemap/bin/../lib/mapping/global_faults.txt -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM25.4 -W4/204/0/0 -O -K -m</div><div>Running: /usr/lib/gmt/bin/pscoast -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -N1/5 -N2/5 -Df -W5 -S120/160/220 -Ia/2/120/160/220 -O -K</div><div>Running: /opt/shakemap/bin/../bin/echo -118.900000 34.563000 | /usr/lib/gmt/bin/psxy -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -Sa0.762 -W6/255/0/0 -L -O -K</div><div>Running: /opt/shakemap/bin/../bin/echo "0 -1.143 9 0 1 5 Map Version 1 Processed 2014-12-15 02:56:10 UTC " | /usr/lib/gmt/bin/pstext -JX16.4727084188/16.51 -R0/16.4727084188/0/16.51 -N -O -K</div><div>Running: /usr/lib/gmt/bin/psbasemap -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -Ba120mf60mWSen -Lfx3.81/1.78/34.5630/150+l -O</div><div>2014-12-14 21:56:10 : mapping: Creating topography files.</div><div><br></div><div>/opt/shakemap/bin/../bin/topo2grd 9583161 -123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 2m regime=active 1 </div><div>Using /opt/shakemap/dem. Final resolution fixed at .</div><div>/opt/shakemap/dem/<a href="http://dem2grd.pl/" target="_blank">dem2grd.pl</a> -123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 tmp.topo2grd.14454 </div><div>HELLO WORLD. I am /opt/shakemap/dem/<a href="http://dem2grd.pl/" target="_blank">dem2grd.pl</a></div><div>EXTRACTING w140n40.grd W:-123.90000000000001 E:-113.90000000000001 S:30.4333333333333 N:38.6833333333333</div><div>/usr/lib/gmt/bin//grdcut -R-123.90000000000001/-113.90000000000001/30.4333333333333/38.6833333333333 w140n40.grd -Gtmp.14455.w140n40</div><div>/usr/lib/gmt/bin//grdcut -R-123.90000000000001/-113.90000000000001/30.4333333333333/38.6833333333333 w140n40.grd -Gtmp.14455.w140n40</div><div>mv tmp.14455.w140n40 tmp.14455.w140</div><div>mv tmp.14455.w140 tmp.topo2grd.14454.grd</div><div>Done with pasting.</div><div>FINAL BOUNDS: -R-123.90000000000001/-113.90000000000001/30.4333333333333/38.6833333333333</div><div>2014-12-14 21:56:10 : mapping: Topography file created.</div><div><br></div><div>Making topo intensity file :</div><div>/usr/lib/gmt/bin/grdgradient /opt/shakemap/bin/../data/9583161/mapping/topo_data.grd -A45 -G/opt/shakemap/bin/../data/9583161/mapping/intens_data.grd -Ne0.6...done.</div><div>/usr/lib/gmt/bin/grdcut -V /opt/shakemap/bin/../data/9583161/mapping/topo_data.grd -G/opt/shakemap/bin/../data/9583161/mapping/Q7xr6eDZaP.grd -R-123.9/-113.90000000000001/30.4416666666666/38.68333333333</div><div>GMT_grd_is_global: no!</div><div>GMT_grd_is_global: no!</div><div>grdcut: File spec:<span style="white-space:pre-wrap"> </span>W E S N dx dy nx ny:</div><div>grdcut: Old:<span style="white-space:pre-wrap"> </span>-123.9<span style="white-space:pre-wrap"> </span>-113.9<span style="white-space:pre-wrap"> </span>30.4333333333<span style="white-space:pre-wrap"> </span>38.6833333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>1200<span style="white-space:pre-wrap"> </span>990</div><div>grdcut: New:<span style="white-space:pre-wrap"> </span>-123.9<span style="white-space:pre-wrap"> </span>-113.9<span style="white-space:pre-wrap"> </span>30.<a href="tel:4416666667" value="+14416666667" target="_blank">4416666667</a><span style="white-space:pre-wrap"> </span>38.6833333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>1200<span style="white-space:pre-wrap"> </span>989</div><div>/usr/lib/gmt/bin/grdsample -V /opt/shakemap/bin/../data/9583161/mapping/Q7xr6eDZaP.grd -G/opt/shakemap/bin/../data/9583161/mapping/topo.grd -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -I30c/30c -Ql</div><div>grdsample: Given domain implies y_inc = 0.00833165</div><div>GMT_grd_is_global: no!</div><div>GMT_boundcond_param_prep determined edgeinfo: gn = 0, gs = 0, nxp = 0, nyp = 0</div><div>grdsample: New grid (-123.9/-113.9/30.443/38.683) nx = 1200 ny = 989 dx = 0.00833333333333 dy = 0.00833164812942 node_offset = 1</div><div>GMT_grd_is_global: no!</div><div>/usr/lib/gmt/bin/grdcut -V /opt/shakemap/bin/../data/9583161/mapping/intens_data.grd -G/opt/shakemap/bin/../data/9583161/mapping/lFn3LcANAe.grd -R-123.9/-113.90000000000001/30.4416666666666/38.68333333333</div><div>GMT_grd_is_global: no!</div><div>GMT_grd_is_global: no!</div><div>grdcut: File spec:<span style="white-space:pre-wrap"> </span>W E S N dx dy nx ny:</div><div>grdcut: Old:<span style="white-space:pre-wrap"> </span>-123.9<span style="white-space:pre-wrap"> </span>-113.9<span style="white-space:pre-wrap"> </span>30.4333333333<span style="white-space:pre-wrap"> </span>38.6833333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>1200<span style="white-space:pre-wrap"> </span>990</div><div>grdcut: New:<span style="white-space:pre-wrap"> </span>-123.9<span style="white-space:pre-wrap"> </span>-113.9<span style="white-space:pre-wrap"> </span>30.<a href="tel:4416666667" value="+14416666667" target="_blank">4416666667</a><span style="white-space:pre-wrap"> </span>38.6833333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>0.00833333333333<span style="white-space:pre-wrap"> </span>1200<span style="white-space:pre-wrap"> </span>989</div><div>/usr/lib/gmt/bin/grdsample -V /opt/shakemap/bin/../data/9583161/mapping/lFn3LcANAe.grd -G/opt/shakemap/bin/../data/9583161/mapping/inten.grd -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -I30c/30c -Ql</div><div>grdsample: Given domain implies y_inc = 0.00833165</div><div>GMT_grd_is_global: no!</div><div>GMT_boundcond_param_prep determined edgeinfo: gn = 0, gs = 0, nxp = 0, nyp = 0</div><div>grdsample: New grid (-123.9/-113.9/30.443/38.683) nx = 1200 ny = 989 dx = 0.00833333333333 dy = 0.00833164812942 node_offset = 1</div><div>GMT_grd_is_global: no!</div><div>Sampling to a finer grid; old: 0.025000/0.024970 new: 30c/30c</div><div>Running: /usr/lib/gmt/bin/grdsample /opt/shakemap/bin/../data/9583161/output/mi.grd -G/opt/shakemap/bin/../data/9583161/mapping/tmp_mi.grd -I30c/30c</div><div>Running: /usr/lib/gmt/bin/grdview /opt/shakemap/bin/../data/9583161/mapping/topo.grd -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000/10/3000 -JM16.51 -JZ1 -G/opt/shakemap/bin/../data/9583161/mapping/tmp_mi.grd -C/opt/shakemap/bin/../lib/mapping/Ii.cpt -I/opt/shakemap/bin/../data/9583161/mapping/inten.grd -Qi72 -O -K 2> /dev/null</div><div>Running: /usr/lib/gmt/bin/grdview /opt/shakemap/bin/../data/9583161/mapping/topo.grd -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000/10/3000 -JM25.4 -JZ1 -G/opt/shakemap/bin/../data/9583161/mapping/tmp_mi.grd -C/opt/shakemap/bin/../lib/mapping/Ii_ntsc.cpt -I/opt/shakemap/bin/../data/9583161/mapping/inten.grd -Qi72 -O -K 2> /dev/null</div><div>Running: /usr/lib/gmt/bin/grdcontour /opt/shakemap/bin/../data/9583161/mapping/_WrpwdfoQR.grd -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -C/opt/shakemap/bin/../lib/mapping/mi_cont.txt -Wafaint,125,0_100:0 -Wc5/255/255/255 -Af12/255/255/255 -D/opt/shakemap/bin/../data/9583161/mapping/cont_mi.xyz -Q20 -m -L1/10 -O -K</div></div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px"><b><font color="#ff0000">mapping hangs for a long time here then spits this message:</font></b></div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px"><div><b><font color="#ff0000">GMT Fatal Error: grdcontour could not reallocate memory [8.00 Gb, n_items = 1073741824]</font></b></div><div>mapping: Error running command:</div><div>/usr/lib/gmt/bin/grdcontour /opt/shakemap/bin/../data/9583161/mapping/_WrpwdfoQR.grd -P -R-123.90000000000001/-113.90000000000001/30.44300000000000/38.68300000000000 -JM16.51 -C/opt/shakemap/bin/../lib/mapping/mi_cont.txt -Wafaint,125,0_100:0 -Wc5/255/255/255 -Af12/255/255/255 -D/opt/shakemap/bin/../data/9583161/mapping/cont_mi.xyz -Q20 -m -L1/10 -O -K|</div></div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px">Thank you for any insights and have a great start to the new year. </div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px"><br></div><div style="font-size:12.727272033691406px">Branden</div><div style="font-size:12.727272033691406px">--</div></div></div></div></div>
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